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Alyssa Pivirotto

Bryn Mawr College

Programs

ACCESS CSSN, Campus Champions

Skills

data-analysis github bash conda python r bioinformatics biology data-science genomics

Teri Platt

Clark Atlanta University

Professor

Programs

Skills

Xilin Qiao

University of Wisconsin-Madison

Programs

ACCESS CSSN

Skills

Sanguthevar Rajasekaran

University of Connecticut

Programs

CAREERS

Skills

David Ryglicki

Programs

Skills

ai computer-vision deep-learning generative-ai neural-networks big-data data-analysis image-processing visualization fortran python scikit-learn slurm netcdf

William Sanders

The Jackson Laboratory

Director, Research IT Infrastructure and Data Services

Programs

Campus Champions

Skills

research-grants software-carpentry bioinformatics machine-learning programming c c++python containers

Amin Sepehri

Pennsylvania State University

Programs

CAREERS

Skills

supervised-learning unsupervised-learning data-analysis linear-programming plotting visualization github optimization fluid-dynamics research-facilitation proposal-development julia matlab python programming scikit-learn machine-learning

Nannan Shan

Purdue University

Senior Computational Scientist

Programs

CCMNet, ACCESS CSSN

Skills

Yun Shen

Boston University

Scientific Program Analyst

Programs

CAREERS, Northeast, ACCESS CSSN, CCMNet

Skills

data-analysis big-data bioinformatics genomics data-science programming r sql software-installation Programming open-ondemand

Gil Speyer

Arizona State University

Scientific Software Engineer

Programs

ACCESS CSSN, Campus Champions

Skills

parallelization optimization memory profiling scaling scripting debugging bioinformatics computational-chemistry quantum-mechanics bash training conda cuda c fortran matlab r gpu

Sathish Srinivasan

Programs

ACCESS CSSN

Skills

ai machine-learning big-data image-processing linear-programming data-analysis visualization data-lifecycle database github sftp cephfs data-provenance data-reproducibility data-wrangling benchmarking profiling fastx gatk opencv pytorch tensorflow galaxy pegasus ansible ceph administering-hpc cluster-management cluster cifs hpc-cluster-architecture networking nfs unix-environment smb hpc-tools prometheus bash cleanup environment-modules git git-lfs modules os permissions screen scripting ssh tcp tcsh tmux vim vm x11 c c++compiling css fortran gcc html java julia mathematica matlab perl programming pthreads python r rstudio-server sas scikit-learn spark spss sql stata xml hadoop batch-jobs lsf pbs slurm sge acls federated-authentication key-management firewall putty rdp vpn vnc terminal-emulation-and-window-management centos containers dependencies docker kubernetes lmod pip podman singularity software-installation version-control

Emma Strand

University of Rhode Island

Programs

CAREERS

Skills

Michael Sundue

The University of Vermont, Dept. of Plant Biology

Programs

Northeast

Skills

bioinformatics

Diana Toups Dugas

New Mexico State University

Director for Instructional and Research Support

Programs

Campus Champions

Skills

research-facilitation training proposal-development workforce-development bioinformatics genomics software-carpentry biology

Ifeoma Ugwuanyi

Rutgers University-Newark

Programs

CAREERS

Skills

data-analysis bioinformatics genomics biology python r sql

Juan Vanegas

Oregon State University

Programs

Northeast

Skills

bash batch-jobs bioinformatics compiling conda environment-modules hpc-cluster-build hpc-operations jupyterhub molecular-dynamics nfs pip python slurm ssh storage x11 mpi

Manas Vishal

University of Massachusetts, Dartmouth

Programs

CAREERS, Northeast, CCMNet

Skills

ai cognitive-bias computer-vision reinforcement-learning supervised-learning unsupervised-learning deep-learning generative-ai llm machine-learning computer-graphics finite-element-analysis plotting visualization data-analysis cloud-computing data data-reproducibility file-transfer github github-pages metadata benchmarking performance-tuning profiling checkpoint scaling core-dump cpu-bound timing-issue debugging tuning memory optimization IO-issue parallelization pytorch paraview opencv jekyll open-ondemand administering-hpc unix-environment hpc-cluster-architecture bash x11 environment-modules git modules os permissions screen scripting ssh tcp tmux project-management affiliations campus-champions abstract citation proposal-development management research-grants publication-database mentorship community-outreach research-facilitation software-carpentry training professional-development matlab c mpi openmp anaconda mathematica rstudio-server ruby c++compiling fortran conda openmpi css perl cuda programming gui gcc programming-best-practices html javascript python julia jupyterhub r batch-jobs job-submission slurm astronomy astrophysics data-science cosmology gravitational-waves artificial-intelligence mathematics firewall vpn vnc containers pip singularity dependencies docker software-installation errors email-duplication email-change

HSIH-TE YANG

Atrium Health

Programs

Skills

anaconda jupyterhub matlab mathematica r python perl conda TAMU ACCESS-allocations bash git x11 molecular-dynamics natural-language-processing gromacs pytorch optimization database big-data visualization llm

Daniel Yi

Carnegie Mellon University

Programs

ACCESS CSSN

Skills

Ying Zhang

University of Rhode Island

Associate Professor

Programs

CAREERS

Skills

bioinformatics