genomics

Mentors and Regional Facilitators

Name	Region	Skills	Interests
Alyssa Pivirotto	ACCESS CSSN, Campus Champions	bash bioinformatics biology conda data-analysis data-science genomics github more...	arcgis machine-learning
Carrie Brown	CAREERS, ACCESS CSSN, CCMNet	bioinformatics cleanup community-outreach data-wrangling distributed-computing genomics github github-pages more...
Daniel Morales	Campus Champions	access access-allocations ACCESS-credits adding-users allocation-management anaconda bash batch-jobs more...	access access-allocations allocation-management bioinformatics biology community-outreach conda deep-learning more...
Diana Toups Dugas	RMACC, SWEETER, Campus Champions	bioinformatics biology genomics proposal-development research-facilitation software-carpentry training workforce-development
Feseha Abebe-Akele	CCMNet	password abstract access access-account access-allocations ACCESS-credits ACCESS-website account more...
Jordan Hayes	Campus Champions	acls administering-hpc amber anaconda api atlas aws bash more...
shuai liu	ACCESS CSSN	ai anaconda azure big-data bioinformatics biology containers data-analysis more...
Nicholas Panchy	Campus Champions	bash bioinformatics biology conda easybuild genomics modules open-ondemand more...
Russell Hofmann	ACCESS CSSN, CCMNet	computational-chemistry data-analysis data-science dft gaussian genomics gromacs kubernetes more...	administering-hpc cluster-support computational-chemistry data-analysis data-science dft gaussian genomics more...
Rob Harbert	Northeast	anaconda batch-jobs big-data bioinformatics biology distributed-computing genomics gis more...
Xiaoqin Huang	ACCESS CSSN	access-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal amber anaconda more...	ACCESS-credits ACCESS-website adding-users affinity-group allocations-extension allocations-proposal amber anaconda more...
William Lai	ACCESS CSSN	administering-hpc ai anaconda archiving backup bash bioinformatics biology more...	administering-hpc ai archiving bash benchmarking big-data bioinformatics biology more...
Yun Shen	CAREERS, Northeast, ACCESS CSSN, CCMNet	big-data bioinformatics data-analysis data-science genomics open-ondemand Programming programming more...

Affinity Groups

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Announcements

Title	Date
Ookami Webinar	02/14/24

Upcoming Events & Trainings

No events or trainings are currently scheduled.

Topics from Ask.CI

Knowledge Base Resources

Title	Category	Tags	Skill Level
Awesome Jupyter Widgets (for building interactive scientific workflows or science gateway tools)	Learning	ai, computer-graphics, plotting, visualization, big-data, data-analysis, deep-learning, image-processing, machine-learning, monte-carlo, neural-networks, data-sharing, data-lifecycle, data-management, data-management-software, data-reproducibility, github, astrophysics, data-science, novel-accelerators, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, open-ondemand, science-gateway, c++, jupyterhub, python	Beginner, Intermediate, Advanced
Biopython Tutorial	Learning	bioinformatics, genomics, python	Beginner, Intermediate, Advanced
How the Little Jupyter Notebook Became a Web App: Managing Increasing Complexity with nbdev	Learning	data-sharing, data-management-software, data-reproducibility, github, workflow, astrophysics, data-science, novel-accelerators, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, science-gateway, software-carpentry, jupyterhub, programming, python	Beginner, Intermediate, Advanced

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Engagements

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People with Expertise

Feseha Abebe-Akele

Elizabeth City State University

Programs

CCMNet

Roles

mentor, researcher/educator, research computing facilitator, CCMNet

Feseha Abebe-Akele

Expertise

password

abstract

access

access-allocations

+109 more tags

Matt Ferguson

Boise State University

Programs

At-Large

Roles

researcher/educator, cssn

picture of Matt Ferguson

Expertise

access

ai

anaconda

bash

+34 more tags

William Lai

Cornell University

Programs

ACCESS CSSN

Roles

mentor, researcher/educator, research computing facilitator, research software engineer, ci systems engineer, Consultant

William KM Lai

Expertise

administering-hpc

ai

anaconda

archiving

backup

+38 more tags

People with Interest

William Lai

Cornell University

Programs

ACCESS CSSN

Roles

mentor, researcher/educator, research computing facilitator, research software engineer, ci systems engineer, Consultant

William KM Lai

Interests

administering-hpc

ai

archiving

bash

benchmarking

+67 more tags

Matt Ferguson

Boise State University

Programs

At-Large

Roles

researcher/educator, cssn

picture of Matt Ferguson

Interests

access

access-account

access-allocations

access-credits

access-website

+72 more tags

Natasha Pavlovikj

University of Nebraska, Lincoln

Programs

CCMNet, Campus Champions

Roles

mentor, researcher/educator, research computing facilitator, CCMNet

Interests

anaconda

bash

batch-jobs

big-data

bioinformatics

+30 more tags