People

Filters

Jordan Hayes

University of California-Riverside

Programs

Campus Champions

Skills

bash anaconda singularity modules gpfs slurm duo compiling conda jupyterhub mpi pip rstudio-server jekyll xml big-data data-management data-transfer file-formats aws cyverse training software-carpentry bioinformatics fastx gatk genomics smrt trinity gaussian gromacs amber charmm namd pytorch scikit-learn comsol atlas git github github-pages programming programming-best-practices cleanup version-control c pthreads c++fortran java python r sql xsede scheduling job-array pending-jobs pre-emption api batch-jobs checkpoint dmtcp docker kubernetes distributed-computing environment-modules parameter-sweeps cpu-bound scripting tmux screen terminal-emulation-and-window-management administering-hpc cluster-management cgroups prometheus cluster-support file-transfer globus x11 vpn ssh smb sftp samba rdp putty vnc federated-authentication cilogon hardware infiniband interconnect nvidia hpc-cluster-build gpu acls hpc-storage cifs nfs spectrum-scale networking dtn ethernet firewall sciencedmz tcp schedulers sge pbs encryption key-management software-installation easybuild spark unix-environment vim vm

Chris Hemme

University of Rhode Island

Bioinformatics Core Director

Programs

CAREERS

Skills

big-data bioinformatics r data-analysis anaconda genomics biology

Xiaoqin Huang

Rice University

Programs

ACCESS CSSN

Skills

ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal anvil bridges-2 darwin delta documentation expanse rockfish stampede2 transfer-su xdmod tickets data-analysis deep-learning dft machine-learning neural-networks openstack globus github benchmarking checkpoint debugging memory optimization parallelization performance-tuning profiling scaling scripting amber bioinformatics charmm gamess gaussian gromacs lammps molecular-dynamics namd pytorch tensorflow biology computational-chemistry data-science genomics quantum-mechanics open-ondemand cgroups condo gpu nvidia batch-jobs schedulers job-array bash git pthreads ssh proposal-development research-facilitation research-grants community-outreach anaconda c c++compiling conda cuda fortran jupyterhub mpi openmp openmpi programming python containers dependencies easybuild docker interactive-mode pip singularity software-installation

Aaron Jezghani

Georgia Institute of Technology

Programs

Campus Champions

Skills

Xiaoluo Jiao

Columbia University, Mailman School of Public Health

Programs

CAREERS

Skills

sas data-wrangling data-management data-reproducibility biology bioinformatics genomics machine-learning psychology git github programming cleanup r

Konda Reddy Karnati

Bowie State University

Programs

Campus Champions

Skills

machine-learning big-data bash ACCESS ACCESS-account management campus-champions xsede professional-development mentorship cuda programming python genomics computational-chemistry artificial-intelligence bioinformatics centos

Audrey Law

Bluegrass Community and Technical College

Instructor, Biotechnology Coordinator

Programs

Kentucky

Skills

data-analysis bioinformatics genomics git github unix-environment

David Liu

Purdue University

Programs

CCMNet

Skills

ai deep-learning generative-ai machine-learning llm NAIRR-pilot neural-networks supervised-learning reinforcement-learning nlp unsupervised-learning linear-programming monte-carlo big-data aws azure cloud cloud-computing cloud-open-source cloud-storage account application-status change-organization delete-account documentation email-change email-duplication profile password login license errors proposal-request reporting tickets verification-code archiving backup data data-access-protocols data-lifecycle data-management data-management-software data-provenance data-reproducibility data-retention data-sharing data-transfer data-wrangling database doi file-formats file-system file-transfer github file-limit github-pages globus metadata quota s3 workflow weka storage sftp scratch checkpoint core-dump cpu-bound dmtcp memory profiling scaling benchmarking debugging IO-issue parallelization optimization performance-tuning tuning timing-issue xalt opencv natural-language-processing pytorch tensorflow api open-ondemand science-gateway administering-hpc cluster-management cgroups gpu DNS hpc-cluster-architecture sdn serverless-hpc provisioning nfs networking bash cleanup environment-modules screen git vim permissions modules os scripting vm x11 ssh tcp tcsh tmux ACCESS ACCESS-account ACCESS-allocations anvil FABRIC expanse open-science-grid jetstream abstract affiliations campus-champions management community-outreach citation mentorship professional-development project-management publication-database research-grants software-carpentry research-facilitation training workforce-development xsede anaconda c c++compiling conda html hadoop gcc gui fortran cuda java javascript julia jupyterhub openmp mpi openmpi programming programming-best-practices pthreads python sas Rust react scikit-learn spark spss sql xml batch-jobs core-hours gridengine job-charging job-array job-accounting job-failure job-sizing job-submission lsf pre-emption pending-jobs pbs process-killed resources slurm schedulers sge scheduling artificial-intelligence computer-science computational-chemistry data-science materials-science mathematics quantum-computing statistics cybersecurity duo encryption federated-authentication firewall key-management putty rdp spectrum-scale secure-data-architecture terminal-emulation-and-window-management vpn vnc containers dependencies docker kubernetes pip version-control software-installation

shuai liu

University of Arkansas

Programs

ACCESS CSSN

Skills

Lenore Martin

University of Rhoide Island

Tenured Associate Professor

Programs

CAREERS

Skills

Vinayak Mathur

Cabrini University

Assistant Professor

Programs

CAREERS

Skills

bioinformatics genomics biology

Aidan McCrillis

University of Rhode Island

Programs

CAREERS

Skills

bioinformatics data-science biology python

Kali McLennan

University of Oklahoma

Programs

Campus Champions, Great Plains

Skills

Brett Milash

University of Utah

Scientific Consultant

Programs

Skills

bioinformatics python

Daniel Morales

Florida International University

Programs

Campus Champions

Skills

Nil Mu

Arizona State University

HPC System Analyst

Programs

CCMNet

Skills

artificial-intelligence bioinformatics data-science computer-science genomics statistics htc hpc-arch-and-perf hpc-operations hpc-tools hpc-cluster-architecture

Jeremiah Olugbami

Georgia Institute of Technology

Programs

Skills

hardware abstract citation mentorship bioinformatics biology chemistry genomics physiology research-grants affiliations

Nicholas Panchy

Michigan State University

Programs

Campus Champions

Skills

biology genomics open-ondemand slurm bash modules conda python r easybuild bioinformatics

Charles Pavloski

University of Illinois at Urbana-Champaign

R&D HPC Engineer / RISE Team Lead (ICDS Advanced HPC Services)

Programs

ACCESS CSSN, Campus Champions, CAREERS

Skills

data-management archiving data-lifecycle sciencedmz storage management file-systems science-gateway cluster-support hardware hpc-operations training

Chuck Pavloski

University of Illinois at Urbana-Champaign

Associate Director for Engagement at NCSA

Programs

Campus Champions, CAREERS

Skills

data-management archiving data-lifecycle sciencedmz storage management file-systems science-gateway cluster-support hardware hpc-operations training

Mark Perri

Sonoma State University

Programs

Campus Champions

Skills

jetstream openstack computational-chemistry gamess namd quantum-mechanics science-gateway programming python docker

Alyssa Pivirotto

Bryn Mawr College

Programs

ACCESS CSSN, Campus Champions

Skills

data-analysis github bash conda python r bioinformatics biology data-science genomics