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Timothy Middelkoop

Internet2

Research Engagement Engineer

Programs

ACCESS CSSN, Campus Champions, CCMNet, Great Plains

Skills

workforce-development python batch-jobs kubernetes software-carpentry containers docker dependencies version-control spack software-installation singularity podman pip lmod interactive-mode putty slurm core-hours scheduling gcc jupyterhub programming programming-best-practices rstudio-server sql abstract citation community-outreach professional-development project-management proposal-development research-facilitation research-grants training jetstream osg affinity-group ACCESS-allocations bash environment-modules git git-lfs modules os permissions screen scripting ssh tcp tmux vim vm administering-hpc ansible cluster cluster-management cluster-support configuration-automation deployment DNS ethernet file-systems hardware hpc-cluster-architecture hpc-cluster-build hpc-getting-started hpc-operations hpc-storage hpc-tools htc infiniband interconnect networking nfs provisioning puppet unix-environment api debugging data-transfer data-sharing file-transfer github github-pages globus s3 quota scratch sftp aws azure cloud cloud-commercial cloud-computing cloud-open-source cloud-storage cloudlab gce openstack linear-programming open-storage-network

Brett Milash

University of Utah

Scientific Consultant

Programs

Skills

bioinformatics python

Daniel Morales

Florida International University

Programs

Campus Champions

Skills

Nil Mu

Arizona State University

HPC System Analyst

Programs

CCMNet

Skills

artificial-intelligence bioinformatics data-science computer-science genomics statistics htc hpc-arch-and-perf hpc-operations hpc-tools hpc-cluster-architecture

Morgan Newton

Santa Monica College

Programs

ACCESS CSSN

Skills

file-transfer archiving backup slurm job-failure job-sizing job-submission bash permissions os ssh professional-development project-management management anaconda c c++java programming openmpi python jupyterhub

Od Odbadrakh

University of Tennessee, Knoxville

Computational Scientist

Programs

ACCESS CSSN

Skills

Jeremiah Olugbami

Georgia Institute of Technology

Programs

Skills

hardware abstract citation mentorship bioinformatics biology chemistry genomics physiology research-grants affiliations

Nicholas Panchy

Michigan State University

Programs

Campus Champions

Skills

biology genomics open-ondemand slurm bash modules conda python r easybuild bioinformatics

Alyssa Pivirotto

Bryn Mawr College

Programs

ACCESS CSSN, Campus Champions

Skills

data-analysis github bash conda python r bioinformatics biology data-science genomics

Ron Rahaman

Georgia Institute of Technology

Programs

Campus Champions

Skills

Sanguthevar Rajasekaran

University of Connecticut

Programs

CAREERS

Skills

Amy Roberts

University of Colorado, Denver

Programs

Campus Champions

Skills

s3 github particle-physics bash git ssh vim os permissions software-carpentry acls containers dependencies docker open-storage-network

Paul Rulis

University of Missouri, Kansas City

Associate Professor of Physics

Programs

Campus Champions

Skills

dft machine-learning monte-carlo neural-networks vectorization parameter-sweeps random-numbers github metadata sftp storage core-dump cpu-bound debugging memory optimization parallelization performance-tuning profiling scaling scripting tuning checkpoint lammps molecular-dynamics paraview pytorch tensorflow materials-science quantum-mechanics comet gpu unix-environment batch-jobs core-hours job-accounting job-submission job-sizing pending-jobs schedulers scheduling slurm bash environment-modules git ssh tcp vim x11 permissions modules os proposal-development project-management research-grants software-carpentry xsede c c++conda fortran java programming openmp mpi programming-best-practices python sql putty encryption vpn terminal-emulation-and-window-management library-paths spack software-installation version-control singularity ai data-analysis computational-chemistry resources abstract affiliations citation xml dependencies

William Sanders

The Jackson Laboratory

Director, Research IT Infrastructure and Data Services

Programs

Campus Champions

Skills

research-grants software-carpentry bioinformatics machine-learning programming c c++python containers

Yun Shen

Boston University

Scientific Program Analyst

Programs

CAREERS, Northeast, ACCESS CSSN, CCMNet

Skills

data-analysis big-data bioinformatics genomics data-science programming r sql software-installation Programming open-ondemand

Shawn Sivy

The College of New Jersey

HPC System Administrator

Programs

Campus Champions, CAREERS

Skills

Gil Speyer

Arizona State University

Scientific Software Engineer

Programs

ACCESS CSSN, Campus Champions

Skills

parallelization optimization memory profiling scaling scripting debugging bioinformatics computational-chemistry quantum-mechanics bash training conda cuda c fortran matlab r gpu

Sathish Srinivasan

Programs

ACCESS CSSN

Skills

ai machine-learning big-data image-processing linear-programming data-analysis visualization data-lifecycle database github sftp cephfs data-provenance data-reproducibility data-wrangling benchmarking profiling fastx gatk opencv pytorch tensorflow galaxy pegasus ansible ceph administering-hpc cluster-management cluster cifs hpc-cluster-architecture networking nfs unix-environment smb hpc-tools prometheus bash cleanup environment-modules git git-lfs modules os permissions screen scripting ssh tcp tcsh tmux vim vm x11 c c++compiling css fortran gcc html java julia mathematica matlab perl programming pthreads python r rstudio-server sas scikit-learn spark spss sql stata xml hadoop batch-jobs lsf pbs slurm sge acls federated-authentication key-management firewall putty rdp vpn vnc terminal-emulation-and-window-management centos containers dependencies docker kubernetes lmod pip podman singularity software-installation version-control

Cody Stevens

Wake Forest University

Programs

Campus Champions, CCMNet

Skills

Emma Strand

University of Rhode Island

Programs

CAREERS

Skills

Cesar Sul

University of Southern California

Programs

ACCESS CSSN, Campus Champions

Skills

astrophysics batch-jobs slurm job-array job-submission bash vim git python c mathematica pip singularity lmod spack pegasus parameter-sweeps monte-carlo modules permissions tmux ssh training research-facilitation matlab