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Understanding Mechanical Properties of Bio-interfaces with HPC Molecular Simulations

Submission Number: 23
Submission ID: 40
Submission UUID: 0287b732-8e95-426e-afe8-d094b74639d1
Submission URI: /form/project

Created: Tue, 09/03/2019 - 13:46
Completed: Tue, 09/03/2019 - 13:48
Changed: Mon, 10/21/2024 - 18:57

Remote IP address: 130.215.55.243
Submitted by: Juan Vanegas
Language: English

Is draft: No
Webform: Project
Understanding Mechanical Properties of Bio-interfaces with HPC Molecular Simulations
Northeast

Project Leader

Juan Vanegas
5415805322
8026560049

Project Information

Molecular simulations are emerging as a new form of “microscopy” that can uniquely probe the behavior of biomolecules and interfacial systems such as biomembranes at the nanometer scale. High resolution techniques such as classical and first principles molecular dynamics (MD) can be used to understand the connection between molecular structure, biological function, and mechanical properties of biomaterials. In this project, students will use high performance MD simulation engines such as GROMACS (www.gromacs.org) to model biological interfaces and use custom local stress codes to characterize the mechanical properties of these systems.